Chameleon Used In Research

Below is a list of publications that used Chameleon for its resaerch. This list has been last updated on 02/01/21 and represents our "best effort" understanding of what papers were published. If you don't find your publication on this list, please report it to contact@chameleoncloud.org. 

If you use Chameleon in a publication, we would appreciate that you cite Chameleon; among others, it makes it easier for us to find your papers. To learn how and for the bibtex quote, please see the FAQ here

 

2020

IGNITE: A Minimax Game Toward Learning Individual Treatment Effects from Networked Observational Data Guo R., Li J., Li Y., Candan K.S., Raglin A., Liu H. In International Joint Conference on Artificial Intelligence (IJCAI). January 2020.

Tracking Disaster Footprints with Social Streaming Data Cheng L., Li J., Candan K.S., Liu H. In Association for the Advancement of Artificial Intelligence (AAAI) Conference. February 2020.

Fine-Grained Entity Typing for Domain Independent Entity Linking Onoe Y., Durrett G. In Association for the Advancement of Artificial Intelligence (AAAI) Conference. February 2020.

Attending to entities for better text understanding Cheng P., Erk K. In Association for the Advancement of Artificial Intelligence (AAAI) Conference. February 2020.

SAN : Scale-Space Attention Networks Garg Y., Candan K.S., Sapino M.L. In IEEE 36th International Conference on Data Engineering (ICDE). IEEE Press. April 2020.

Fine-Grained Instruction Placement in Polymorphic Computing Architectures Hentrich D., Oruklu E., Saniie J. In IEEE International Symposium on Circuits and Systems (ISCAS). IEEE Press. May 2020.

RIVA: Robust Integrity Verification Algorithm for High-Speed File Transfers Charyyev B., Arslan E. In IEEE Transactions of Parallel and Distributed Systems. June 2020.

Managing data constraints in database-backed web applications Yang J., Sethi U., Yan C., Cheung A., Lu S. In 42nd International Conference on Software Engineering, 2020 (ICSE'20). June 2020.

Utilizing time series data embedded in electronic health records to develop continuous mortality risk prediction models: A sepsis case study Gupta A., Liu T., Crick C. In Statistical Methods in Medical Research. June 2020.

A Practical Data Repository for Causal Learning with Big Data Cheng L., Guo R., Moraffah R., Candan K.S., Raglin A., Liu H. In International Symposium on Benchmarking, Measuring and Optimization. June 2020.

TiFL: A Tier-based Federated Learning System Chai Z., Ali A., Zawad S., Treux S., Anwar, A., Barcaldo N., Zhou Y., Ludwig H., Yan F., Cheng Y. In International Symposium on High-Performance Parallel and Distributed Computing (HPDC). June 2020.

The Rodinia Benchmark Suite in SYCL Jin Z. In ANL/ALCF. Argonne National Lab. June 2020.

Representation Learning for Imbalanced Cross-Domain Classification Cheng L., Guo R., Candan K.S., Liu H. In Proceedings of the 2020 SIAM International Conference on Data Mining (SDM). July 2020.

Driverless vehicle security: Challenges and future research opportunities De La Torre G., Rad P., Choo K.K.R. In Future Generation Computer Systems. July 2020.

Ecological management of stochastic systems with long transients Boettiger C. In Theoretical Ecology. August 2020.

Ribbon: High Performance Cache Line Flushing for Persistent Memory Wu K., Peng I., Ren J., Li D. In PACT '20: Proceedings of the ACM International Conference on Parallel Architectures and Compilation Techniques. September 2020.

GTT: Guiding the Tensor Train Decomposition Li M., Candan K.S., Sapino M.L. In International Conference on Similarity Search and Applications (SISAP). October 2020.

FEDAT: A Communication-Efficient Federated Learning Method With Asynchronous Tiers Under Non-IId Data Chai Z., Chen Y., Zhao L., Cheng Y., Rangwala H. In arxiv. October 2020.

Noise Adaptive Tensor Train Decomposition for Low-Rank Embedding of Noisy Data Li X., Candan K.S., Sapino M.L. In International Conference on Similarity Search and Applications (SISAP). October 2020.

Thermal management for FPGA nodes in HPC systems Luo Y., Zhao J., Arnav A., Ogrenci-Memik S., Yoshii K. In ACM Transactions on Design Automation of Electronic Systems (TODAES). October 2020.

Network Intrusion Detection System as a Service in OpenStack Cloud Xu C., Zhang R., Xie M., and Yang L. In IEEE International Conference on Computing, Networking and Communications 2020 (ICNC’20). IEEE Press. October 2020.

Taming I/O Variation on QoS-less HPC Storage: What Can Applications do? Qiao Z. et al. In SC'20 November 2020.

Speeding Up SpMV for Power-Law Graph Analytics by Enhancing Locality and Vectorization Yesil S., Heidarshenas A., Morrison A., Torrellas J. In SC20. November 2020.

NetGraf: A Collaborative Network Monitoring Stack for Network Experimental Testbeds Kaur D., Kiran M. In SC20. November 2020.

2019

Combining Physically-Based Modeling and Deep Learning for Fusing GRACE Satellite Data: Can We Learn from Mismatch? Sun et al. In Water Resources Research. January 2019.

Enabling HPC Workloads on Cloud Infrastructure Using Kubernetes Container Orchestration Mechanisms Beltre A. M., Saha P., Govindaraju M., Younge A., Grant R. E. In IEEE/ACM International Workshop on Containers and New Orchestration Paradigms for Isolated Environments in HPC (CANOPIE-HPC). IEEE Press. 2019.

Towards Enabling Dynamic Resource Estimation and Correction for Improving Utilization in an Apache Mesos Cloud Environment Rattihalli G., Govindaraju M., Tiwari D. In 19th IEEE/ACM International Symposium on Cluster and Grid Computing (CCGrid). IEEE Press. 2019.

AlloX: Allocation across Computing Resources for Hybrid CPU/GPU clusters Le T. N., Sun X., Chowdhury M., Liu Z. In ACM SIGMETRICS Performance Evaluation Review. January 2019.

KubeSphere: An Approach to Multi-Tenant Fair Scheduling for Kubernetes Clusters Beltre A., Saha P., Govindaraju M. In IEEE Cloud Summit. IEEE Press. 2019.

Ecological Metadata as Linked Data Boettiger C. In Journal of Open Source Software. February 2019.

Runtime Concurrency Control and Operation Scheduling for High Performance Neural Network Training Liu J., Li D., Kestor G., Vetter J. In 33th International Parallel and Distributed Processing Symposium (IPDPS) February 2019.

A Module-based Approach to Teaching Big data and Cloud Computing Topics at CS Undergraduate Level Deb D., Fuad M., Irwin K. In SIGCSE ’19: the 50th ACM Technical Symposium on Computer Science Education. February 2019.

Architecture-Aware, High Performance Transactionfor Persistent Memory Wu K., Ren J., Li D. In arXiv March 2019.

Implicit Argument Prediction as Reading Comprehension Cheng P., Erk K. In American Association for Applied Linguistics (AAAL) Con. March 2019.

Distributed machine learning cloud teleophthalmology IoT for predicting AMD disease progression Das A., et al In Future Generation Computer Systems. April 2019.

Modeling MPTCP Performance Lee J., Im Y., Lee J. In IEEE Communications Letters. IEEE Press. April 2019.

A deep learning approach to anomaly detection in geological carbon sequestration sites using pressure measurements Zhong Z., Sun,A. Y., Yang Q., Ouyang, Q. In Journal of Hydrology. April 2019.

Bifurcation or state tipping: assessing transition type in a model trophic cascade Boettiger C., Batt R. In Journal of Mathematical Biology. April 2019.

Understanding the Impact of Dynamic Power-Capping on Application Progress Ramesh S., Perarnau S., Bhalachandra S., Malony A. D., Beckman P. In IEEE International Parallel and Distributed Processing Symposium (IPDPS). May 2019.

Opera: Data Access Pattern Similarity Analysis To Optimize OpenMP Task Affinity Ren J., Liao C., Li D. In 24th International Workshop on High-Level Parallel Programming Models and Supportive Environments. IEEE Press. May 2019.

Resolving the Measurement Uncertainty Paradox in Ecological Management Memarzadeh M., Boettiger C. In American Naturalist. May 2019.

Towards Taming the Resource and Data Heterogeneity in Federated Learning Chai Z., Fayyaz H., Fayyaz Z., Anwar A., Zhou Y., Baracaldo N., Ludwig H., Cheng Y. In 2019 USENIX Conference on Operational Machine Learning (OpML). May 2019.

Reasoning Analytically About Password-Cracking Software Liu E., Nakanishi A., Golla M., Cash D., Ur B. In IEEE Symposium on Security and Privacy. IEEE Press. May 2019.

Corporate Editors in the Evolving Landscape of OpenStreetMap Anderson J., Sarkar D., Palen L. In International Journal of GeoInformation. May 2019.

Towards Securing Data Transfers Against Silent Data Corruption Charyyev B., Alhussen A., Sapkota H., Pouyoul E., Gunes M. H., Arslan E. In IEEE/ACM CCGrid May 2019.

Predicting the tail latency of containerized microservices in the cloud Rahman J., Lama P. In IEEE International Conference on Cloud Engineering (IC2E). IEEE Press. June 2019.

Learning to Denoise Distantly-Labeled Data for Entity Typing Onoe Y., Durrett G. In North American Chapter of the Association for Computational Linguistics (NAACL) Conference. June 2019.

Understanding dataset design choices for multi-hop reasoning Chen J., Durrett G. In North American Chapter of the Association for Computational Linguistics (NAACL) Conference. June 2019.

Building complex event processing capability for intelligent environmental monitoring Sun A., Zhong Z., Jeong H., Yang Q. In Environmental Modeling & Software. June 2019.

RACKNet: Robust Allocation of Convolutional Kernels in Neural Networks for Image Classification Garg Y., Candan K.S. In ICMR '19: Proceedings of the 2019 on International Conference on Multimedia Retrieval. June 2019.

Heterogeneity-Aware Data Placement in Hybrid Clouds Marquez J.D., Gonzalez J.D., Mondragon O.H. In Cloud Computing – CLOUD 2019. June 2019.

Towards self-managing cloud storage with Reinforcement Learning Noel R. R., Mehra R., Lama P. In IEEE International Conference on Cloud Engineering (IC2E). IEEE Press. June 2019.

Rebuilding global fisheries under uncertainty Memarzadeh M., Britten G.L., Worm B., Boettiger C. In Proceedings of the National Academy of Sciences. June 2019.

Predicting CO2 plume migration in heterogeneous formations using conditional deep convolutional generative adversarial network Zhong Z., Sun A. Y., Jeong H. In Water Resources Research. June 2019.

EasyCrash: Exploring Non-Volatility of Non-Volatile Memory for High Performance Computing Under Failures Ren J., Wu K., Li D. In arXiv June 2019.

Contributor-Centric Analytics For OpenStreetMap: Approaches to Full Stack, Metadata-Driven Analysis Infrastructure for an Open Geospatial Data Platform Anderson J. In PhD Dissertation. July 2019.

A Framework for Characterizing Cyber Attack Reconnaissance Behaviors Garcia Lebron R., Xu S. In PhD Dissertation. July 2019.

Cross-layer Optimization of Big Data Transfer Throughput and Energy Consumption DiTacchio L., Nine Z., Kosar T., Bulut F., Huang J. In 2019 IEEE 12th International Conference on Cloud Computing (CLOUD). IEEE Press. July 2019.

Advances in reliable file-stream multicasting over multi-domain Software Defined Networks (SDN) Tan Y., Chen S., Emmerson S., Zhang Y., Veeraraghavan M. In IEEE ICCCN. IEEE Press. July 2019.

Matrix Factorization with Interval-Valued Data Li M., Di Mauro F., Candan K.S., Sapino M.L. In IEEE Transactions on Knowledge and Data Engineering. IEEE Press. September 2019.

Kube-Knots: Resource Harvesting through Dynamic Container Orchestration in GPU-based Datacenters Thinakaran P., Gunasekaran J. R., Sharma B., Kandemir M. T., Das C. R. In IEEE International Conference on Cluster Computing (CLUSTER). IEEE Press. September 2019.

Query-Focused Scenario Construction Wang S., Durrett G., Erk K. In Empirical Methods in Natural Language Processing (EMNLP) Conference. September 2019.

Neural Extractive Text Summarization with Syntactic Compression Xu J., Durrett G. In Empirical Methods in Natural Language Processing (EMNLP) Conference. September 2019.

Corporate Editors in the Evolving Landscape of OpenStreetMap: A Close Investigation of the Impact to the Map & Community Anderson J., Sarkar D., Palen L. In State of the Map Conference. September 2019.

DeepRoute on Chameleon: Experimenting with Large-scale Reinforcement Learning and SDN on Chameleon Testbed Mohammed B., Kiran M., Krishnaswamy N. In IEEE 27th International Conference on Network Protocols (ICNP). October 2019.

Adaptive Neural Network-Based Approximation to Accelerate Eulerian Fluid Simulation Dong W., Liu J., Xie Z., Li D. In 31st ACM/IEEE International Conference for High Performance Computing, Performance Measurement, Modeling and Tools (SC). November 2019.

Complicacy-Guided Parameter Space Sampling for Knowledge Discovery with Limited Simulation Budgets Chen X., Mathesen L., Pedrielli G., Candan K.S. In IEEE International Conference on Big Knowledge (ICBK). IEEE Press. November 2019.

A New Polymorphic Computing Architecture Based on Fine-Grained Instruction Mobility Hentrich D., Oruklu E., Saniie J. In SC19. November 2019.

CA-Smooth: Content Adaptive Smoothing of Time Series Leveraging Locally Salient Temporal Features Rossini R., Poccia S.R., Candan K.S., Sapino M.L. In MEDES '19: Proceedings of the 11th International Conference on Management of Digital EcoSystems. November 2019.

Performance Analysis of Deep Learning Workloads Using Roofline Trajectories Javed M.H., Ibrahim K., Lu X. In CCF Transactions on High Performance Computing (THPC). November 2019.

Understanding Application Recomputability without Crash Consistency in Non-Volatile Memory Ren J., Wu K., Li D. In Memory Centric Programming for HPC workshop. November 2019.

CARE: Compiler-Assisted Recovery from Soft Failures Chen C., Eisenhauer G., Pande S., Guan Q. In SC19. November 2019.

A Case Study on Using Deep Learning for Network Intrusion Detection Fernandez G.C., Xu S. In IEEE Milcom. November 2019.

DeepRoute: Herding Elephant and Mice Flows with Reinforcement Learning Kiran M., Mohammed B., Krishnaswamy N. In 2nd IFIP International Conference on Machine Learning for Networking (MLN). December 2019.

Subspace Communication Driven Search for High Dimensional Optimization Mathesen L., Chandrasekar K. K., Li X., Pedrielli G., Candan K. S. In Winter Simulation Conference (WSC). IEEE Press. December 2019.

Generalized Ordinal LEarning Framework (GOLF) for Decision Making with Future Simulated Data Pedrielli G., Candan K.S., Chen X., Mathesen L., Inanalouganji A., Xu J., Chen C., Lee L. In Asia-Pacific Journal of Operational Research. December 2019.

Subspace Communication Driven Search for High Dimensional Optimization Mathesen L., Chandrasekar K.K., Li X., Pedrielli G., Candan K.S. In Winter Simulation Conference (WSC). IEEE Press. December 2019.

Generalized Ordinal LEarning Framework (GOLF) for Decision Making with Future Simulated Data Pedrielli G., Candan K.S., Chen X., Mathesen L., Inanalouganji A., Xu J., Chen C., Lee L. In Asia-Pacific Journal of Operational Research. December 2019.

Mitigating and Tolerating Read Disturbance in STT-MRAM-Based Main Memory via Device and Architecture Innovations Aboutalebi A.H., Ahn E.C., Mao B., Wu S., Duan L. In IEEE Transactions on Computer-Aided Design of Integrated Circuits and Systems (IEEE TCAD). IEEE Press. December 2019.

2018

Robust Multi-Variate Temporal Features of Multi-Variate Time Series Liu S., Poccia S.R., Candan K.S., Sapino M.L., Wang X. In Transactions on Multimedia Computing, Communications, and Applications (TOMCCAP). January 2018.

AI Thinking for Cloud Education Platform with Personalized Learning Rad P., Roopaei M., Beebe N., Shadaram M., Au Y. In 51st Hawaii International Conference on System Sciences. January 2018.

High Speed Transfer Optimization Based on Historical Analysis and Real-time Tuning Arslan E., Kosar T. In IEEE Transactions on Parallel and Distributed Systems (TPDS). January 2018.

Tromino: Demand and DRF Aware Multi-Tenant Queue Manager for Apache Mesos Cluster Saha P., Beltre A., Govindaraju M. In 2018 IEEE/ACM 11th International Conference on Utility and Cloud Computing (UCC). IEEE Press. 2018.

IMS-DTM: Incremental Multi-Scale Dynamic Topic Models Chen X., Candan K.S., Sapino M.L. In AAAI Conference on Artificial Intelligence. February 2018.

Lung nodule detection from CT scans using 3D convolutional neural networks without candidate selection Jenuwine N.M., Mahesh S.N., Furst J.D., Raicu D.S. In SPIE Medical Imaging Conference. February 2018.

Transparent Orchestration of Task-based Parallel Applications in Containers Platforms Ramon-Cortes C., Serven A., Ejarque J., Lezzi D., Badia R.M. In Journal of Grid Computing. February 2018.

Improving the SSD Performance by Exploiting Request Characteristics and Internal Parallelism Mao B., Wu S., Duan L. In IEEE Transactions on Computer-Aided Design of Integrated Circuits and Systems (TCAD). IEEE Press. February 2018.

Understanding and Auto-Adjusting Performance-Sensitive Configurations Wang S., Li C., Sentosa W., Hoffmann H., Lu S. In 23rd International Conference on Architectural Support for Programming Languages and Operating Systems (ASPLOS). March 2018.

Testing Cloud Applications under Cloud-Uncertainty Performance Effect  Wang W. et al. In IEEE 11th International Conference on Software Testing, Verification and Validation (ICST). IEEE Press. April 2018.

Cross-layer Optimization for Virtual Machine Resource Management Zhao M., Wang L., Lv Y., Xu J. In IEEE International Conference on Cloud Engineering (IC2E). IEEE Press. April 2018.

From noise to knowledge: how randomness generates novel phenomena and reveals information Boettiger C. In Ecology Letters. May 2018.

How not to structure your database-backed web applications: a study of performance bugs in the wild Yang J., Yan C., Subramaniam P., Lu S., Cheung A. In International Conference on Software Engineering (ICSE). May 2018.

A Polymorphic Computing Architecture Based on a Dataflow Processor Core Hentrich D. In Illinois Institute of Technology PhD Thesis. May 2018.

Teaching Big Data and Cloud Computing: A Modular Approach Deb D., Cousins S., Fuad M. In IEEE International Parallel and Distributed Processing Symposium Workshops (IPDPSW). IEEE Press. May 2018.

A Step Towards Hadoop Dynamic Scaling Fu Q., Timkovich N., Riteau P., Keahey K. In 20th IEEE International Conference on High-Performance Computing and Communications (HPCC). June 2018.

Lightweight Authentication of Fault-Tolerant Topic-Channel Queries in Distributed Systems Behrens H., Candan K.S. In ACM International Symposium on High-Performance Parallel and Distributed Computing. June 2018.

IoT-Hub: New IoT Data-Platform for Virtual Research Environments Filguiera R., Ferreira da Silva R., Deelman E., Christodoulou V., Krause A. In 10th International Workshop on Science Gateways (IWSG). June 2018.

Are Existing Knowledge Transfer Techniques Effective For Deep Learning on Edge Devices? Sharma R., Biookaghazadeh S., Zhao M. In 27th International Symposium on High-Performance Parallel and Distributed Computing (EDGE) June 2018.

CELIA: A Device and Architecture Co-Design Framework for STT-MRAM-Based Deep Learning Acceleration Yan H., Cherian H.R., Ahn E.C., Duan L. In ACM International Conference on Supercomputing (ICS). June 2018.

Evaluation of Docker Containers for Scientific Workloads in Cloud Saha P., Beltre A., Uminski P., Govindaraju M. In Practice and Experience in Advanced Research Computing (PEARC). July 2018.

Analysis of Dynamically Switching Energy-Aware Scheduling Policies for Varying Workloads Kaushik P., Kothawale A., Jain A., DelValle R., Govindaraj M. In IEEE International Conference on Cloud Computing (IEEE CLOUD). IEEE Press. July 2018.

Are FPGAs Suitable for Edge Computing? Biookaghazadeh S., Zhao M., Ren F. In USENIX Workshop on Hot Topics in Edge Computing (HotEdge). July 2018.

Exploring the Fairness and Resource Distribution in an Apache Mesos Environment Saha P., Beltre A., Govindaraju M. In IEEE International Conference on Cloud Computing (IEEE CLOUD). IEEE Press. July 2018.

DataStorm-FE: A Data- and Decision-Flow and Coordination Engine for Coupled Simulation Ensembles Behrens H., Candan K.S., Chen X., Gadkari A., Garg Y., Li M-L., Li X., Liu S., Martinez N., Poccia S., Ravindrath M., Sapino M.L. In Proceedings of the VLDB Endowment. August 2018.

Adaptive management of ecological systems under partial observability Memarzadeh M., Boettiger C. In Biological Conservation. August 2018.

DataStorm-FE: A Data- and Decision-Flow and Coordination Engine for Coupled Simulation Ensembles Behrens H.W., Candan K.S., Chen X., Gadkari A., Garg Y., Li M., Li X., Liu S., Martinez N., Poccia S., Ravindrath M., Sapino M.L. In Proceedings of the VLDB Endowment. August 2018.

Managing Larger Data on a GitHub Repository Boettiger C. In Journal of Open Source Software. September 2018.

Application Aware Tuning of Reconfigurable Multi-Layer Perceptron Architectures Sanaullah A., Yang C., Herbordt M., Alexeev Y., Yoshii K. In IEEE High Performance Extreme Computing Conference (HPEC). IEEE Press. September 2018.

Energy-Aware Data Throughput Optimization for Next Generation Internet Kosar T., Alan I. In Information Sciences Journal. October 2018.

Discovering State-Parameter Mappings in Subsurface Models Using Generative Adversarial Networks Sun, A.Y. In Geophysical Research Letters. October 2018.

Effective Tensor-Based Data Clustering Through Sub-Tensor Impact Graphs Candan K.S., Huang S., Li X., Sapino M.L. In Clustering Methods for Big Data Analytics. October 2018.

OpenStreetMap Data Analysis Workshop Fitzsimmons S. In OpenStreetMap conference State of the Map. October 2018.

Adversarially-Resistant On-Demand Topic Channels for Wireless Sensor Networks Behrens H.W., Candan K. S. In IEEE International Symposium on Reliable Distributed Systems. IEEE Press. October 2018.

PowerStation: Automatically detecting and fixing inefficiencies of database-backed web applications in IDE Yang J., Yan C., Subramaniam P., Lu S., Cheung A. In ACM Symposium on the Foundations of Software Engineering (Demo). October 2018.

Big Data Transfer Optimization Through Adaptive Parameter Tuning Arslan E., Pehlivan B., Kosar T. In Journal of Parallel and Distributed Computing (JPDC). October 2018.

Minimizing Thermal Variation in Heterogeneous HPC Systems with FPGA Nodes Luo Y., Wang X., Ogrenci-Memik S., Memik G., Yoshii K., Beckman P. In IEEE International Conference on Computer Design (ICCD). IEEE Press. October 2018.

Effective Use of Context in Noisy Entity Linking Mueller D., Durrett G. In Empirical Methods in Natural Language Processing (EMNLP) Conference. October 2018.

Spherical Latent Spaces for Stable Variational Autoencoders Xu J., Durrett G. In Empirical Methods in Natural Language Processing (EMNLP) Conference. October 2018.

The Curious Case of Container Orchestration and Scheduling in GPU-based Datacenters Thinakaran P., Raj J., Sharma B., Kandemir M.T., Das C.R. In ACM Symposium on Cloud Computing (SoCC). October 2018.

Simulation-based Optimization as a Service for Dynamic Data-driven Applications Systems Li Y., Shekhar S., Vorobeychik Y., Koutsoukos X., Gokhale A. In Blasch E., Ravela S., Aved A. (eds) Handbook of Dynamic Data Driven Applications Systems November 2018.

Efficient Allocation and Heterogeneous Composition of NVM Crossbar Arrays for Deep Learning Acceleration Yan H., Aboutalebi A.H., Duan L. In 37th IEEE International Performance Computing and Communications Conference (IPCCC). November 2018.

A Community of Practice Around Peer-review for Long-term Research Software Sustainability Ram K., Boettiger C., Chamberlain S., Ross N., Salmon M., Butland S. In Computing in Science & Engineering. IEEE Press. November 2018.

Runtime Data Management on Non-Volatile Memory-Based Heterogeneous Memory for Task Parallel Programs Wu K., Ren J., Li D. In 30th ACM/IEEE International Conference for High Performance Computing, Networking, Storage and Analysis (SC). November 2018.

Spark-DIY: A Framework for Interoperable Spark Operations with High Performance Block-Based Data Models Caino-Lores S., Carretero J., Nicolae B., Yildiz O., Peterka T. In IEEE BDCAT. December 2018.

Real-Time Data Analysis for Medical Diagnosis using FPGA Accelerated Neural Networks Sanaullah A., Herbordt M., Yang C., Alexeev Y., Yoshii K. In BMC Special Issue December 2018.

GreenDataFlow: Minimizing the Energy Footprint of Global Data Movement Nine Z., Di Tacchio L., Imran A., Kosar T., Bulut F., Hwang J. In IEEE BIGDATA. December 2018.

2017

AN ALMA AND MagAO STUDY OF THE SUBSTELLAR COMPANION GQ LUP B Wu Y., Sheehan P.D., Males J.R., Close L.M., Morzinski K.M., Teske J.K., Haug-Baltzell A., Merchant N., Lyons E. In The Astrophysical Jounal. January 2017.

HPC Meets Cloud: Opportunities and Challenges in Designing High-Performance MPI and Big Data Libraries on Virtualized InfiniBand Clusters Panda D. K. In Int’l Workshop on Virtualization Solutions for High-Performance Computing (VisorHPC), in conjunction with HIPEAC ‘17 conference. January 2017.

Trace: A High-Throughput Tomographic Reconstruction Engine for Large-Scale Datasets Bicer T., Gursoy D., De Andrade V., Kettimuthu R., Scullin W., De Carlo F., Foster I. T. In Special Issue on High-Throughput X-Ray Imaging and Algorithms, Advanced Structural and Chemical Imaging. January 2017.

SIMDMS: Data Management and Analysis to Support Decision Making through Large Simulation Ensembles Poccia S.R., Sapino M.L., Liu S., Chen X., Garg Y., Huang S., Kim J.H., Li X., Nagarkar P., Candan K.S. In Advances in Database Technology - EDBT 2017 January 2017.

Scalable Capabilities for Spatial Data Synthesis Wang S., Keahey K., Padmanabhan A. In DIBBS Workshop. January 2017.

A Study of Single-Sided HPC Communication Paradigm Using Chameleon Bare-Metal Cluster Shi, J.Y., Kosman K., Evans T., Celik Y. In Computing, Networking and Communication (ICNC) International Conference. IEEE Press. January 2017.

Automating NEURON Simulation Deployment in Cloud Resources Stockton D.B., Santamaria F. In Neuroinformatics. January 2017.

Efficient Memory Disaggregation with Infiniswap Gu J., Lee Y., Zhang Y., Chowdhury M., Shin K. In NSDI March 2017.

Transparent execution of task-based parallel applications in Docker with COMP Superscalar Anton V., Ramón-Cortes C. , Ejarque J., Badia R.M. In 25th Euromicro International Conference on Parallel Distributed and Network-based Processing. IEEE Press. March 2017.

nTD: Noise-Profile Adaptive Tensor Decomposition Li X., Candan K.S., Sapino M.L. In WWW '17: Proceedings of the 26th International Conference on World Wide Web April 2017.

High-Performance Virtual Machine Migration Framework for MPI Applications on SR-IOV enabled InfiniBand Clusters Zhang J., Lu X., Panda D. K. In 31st IEEE International Parallel and Distributed Processing Symposium (IPDPS). IEEE Press. May 2017.

Optical Switch in the Middle (OSM) Architecture for DCNs with Hadoop Adaptations Wang X., Veeraraghavan M., Lin Z., Oki E. In IEEE ICC. IEEE Press. May 2017.

Enabling Distributed Software-Defined Environments Using Dynamic Infrastructure Service Composition Abdelbaky M., Diaz-Montes J., Unuvar M., Romanus M., Steinder M., Parashar M. In CCGrid. May 2017.

An Algebra for Distributed Big Data Analytics Fegaras L. In Journal of Functional Programming. May 2017.

Accelerating OpenStack Swift with RDMA for Building an Efficient HPC Cloud Gugnani S., Lu X., Panda D. K. In 17th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing (CCGrid). IEEE Press. May 2017.

Antibiotic-Induced Depletion of Anti-Inflammatory Clostridia Is Associated with the Development of Graft-Versus-Host Disease in Pediatric Stem Cell Transplantation Patients Simms-Waldrip T. R., Sunkersett G., Coughlin L. A., Savani M. R., Arana C., Kim J., Kim M., Zhan X., Greenberg D. E., Xie Y., Davies S. M., Koh A. Y. In Biol Blood Marrow Transplant. May 2017.

Argo NodeOS: Toward Unified Resource Management for Exascale Perarnau S., Zounmevo J.A., Dreher M., Van Essen B., Gioiosa R., Iskra K., Gokhale M., Yoshii K., Beckman P. In IEEE International Parallel and Distributed Processing Symposium (IPDPS). IEEE Press. May 2017.

Time and Energy to Solution Evaluation for the Three-Point Angular Correlation Function Gomez-Iglesias A., Cardenas-Montes M. In IEEE International Parallel and Distributed Processing Symposium Workshops (IPDPSW). IEEE Press. May 2017.

A Comparison of System Performance on a Private OpenStack Cloud and Amazon EC2 Kang M., Kang D., Walters J.P., Crago S. In IEEE 10th International Conference on Cloud Computing (CLOUD). IEEE Press. June 2017.

Machine learning-based temperature prediction for runtime thermal management across system components Zhang K., Guliani A., Ogrenci-Memik S., Memik G., Yoshii K., Sankaran R., Beckman P. In IEEE Transactions on Parallel and Distributed Computing. IEEE Press. July 2017.

Traffic-sensitive Live Migration of Virtual Machines Deshpande U., Keahey K. In Future Generation Computer Systems. July 2017.

Evaluation of a Floating-point Intensive Kernel on FPGA A Case Study of Geodesic Distance Kernel Jin Z., Finkel H., Yoshii K., Cappello F. In Euro-Par, 23rd International European Conference on Parallel and Distributed Computing. August 2017.

Scalability Dilemma and Statistic Multiplexed Computing -- A Theory and Experiment Shi J.Y., Celik Y. In Advances in Science, Technology and Systems Journal. August 2017.

Kaleido: Enabling Efficient Scientific Data Processing on Big-Data Systems Biookaghazadeh S., Zhou S., Zhao M. In 12th International Conference on Networking, Architecture, and Storage. IEEE Press. August 2017.

Testbeds Support for Reproducible Research Nussbaum L. In ACM SIGCOMM Reproducibility Workshop. August 2017.

Personalized PageRank in Uncertain Graphs with Mutually Exclusive Edges Kim J.H., Li M., Candan K.S., Sapino M.L. In Special Interest Group on Information Retrieval (SIGIR). August 2017.

Students Use CyVerse to Help Predict Mosquito-Borne Diseases External coverage In University of Arizona News September 2017.

MPLEX: In-situ Big Data Processing with Compute-Storage Multiplexing Rahman J., Lama P. In IEEE 25th International Symposium on Modeling, Analysis, and Simulation of Computer and Telecommunication Systems (MASCOTS). IEEE Press. September 2017.

Evaluating Irregular Memory Access on OpenCL FPGA Platforms: a Case Study with XSBench Luo Y., Wen X., Yoshii K., Ogrenci-Memik S., Memik G., Finkel H., Cappello F. In 27th International conference on Field-Programmable Logic and Applications. IEEE Press. September 2017.

Real-Time Data Analysis and Autonomous Steering of Synchrotron Light Source Experiments Bicer T., Gursoy D., Kettimuthu R., Foster I. T., Ren B., De Andrede V., De Carlo F. In International eScience Conference (eScience). October 2017.

Enabling NVM-Based Deep Learning Acceleration Using Nonuniform Data Quantization Yan H., Ahn E.C., Duan L. In International Conference on Compilers, Architecture, and Synthesis for Embedded Systems (CASES). October 2017.

Enabling Reliable Main Memory Using STT-MRAM via Restore-Aware Memory Management Aboutalebi A.H., Duan L. In International Conference on Compilers, Architecture, and Synthesis for Embedded Systems (CASES). October 2017.

FlowPaP and FlowReR: Improving Energy Efficiency and Performance for STT-MRAM-Based Handheld Devices under Read Disturbance Yan H., Jiang L., Duan L., Lin W., John E. In International Conference on Compilers, Architecture, and Synthesis for Embedded Systems (CASES). October 2017.

Run Time Prediction for Big Data Iterative ML Algorithms: a KMeans case study Rodrigues E., Morla R. In arXiv October 2017.

Finding a Needle in a Field of Haystacks: Metadata Search for Distributed Research Repositories Keleher A., Chard K., Foster I., Orhean A.I., Raicu I. In SC17. November 2017.

System and Method for Network-scale Reliable Parallel Computing Shi J. Y. In USPTO. November 2017.

RAPS: Restore-Aware Policy Selection for STT-MRAM-Based Main Memory Under Read Disturbance Aboutalebi A.H., Duan L. In IEEE International Conference on Computer Design (ICCD). IEEE Press. November 2017.

TRIP: An Ultra-Low Latency, TeraOps/s Reconfigurable Inference Processor for Multi-Layer Perceptrons Sanaullah A., Yang C., Alexeev Y., Yoshii K., Herbordt M. C. In International Conference for High Performance Computing, Networking, Storage and Analysis. November 2017.

Boosting Curative Surgery Success Rates with FPGAs Computational Approaches for Cancer Sanaullah A., Herbordt M., Yang C., Alexeev Y., Yoshii K. In CAFCW17 at SC17. November 2017.

An Introduction to Rocker: Docker Containers for R Boettiger C., Eddelbuettel D. In The R Journal. December 2017.

Data Transfer Optimization Based on Offline Knowledge Discovery and Adaptive Real-time Sampling Nine Z., Guner K., Huang Z., Wang X., Xu J., Kosar T. In IEEE BIGDATA. December 2017.

LambdaLink: an Operation Management Platform for Multi-Cloud Environments Keahey K., Riteau P., Timkovich N. In 10th IEEE/ACM International Conference on Utility and Cloud Computing. December 2017.

2016

Designing Virtualization-aware and Automatic Topology Detection Schemes for Accelerating Hadoop on SR-IOV-enabled Clouds Gugnani S., Lu X., Panda D. K. In 8th IEEE International Conference on Cloud Computing Technology and Science (CloudCom), Luxembourg 2016.

Porting the Distem Emulator to the CloudLab and Chameleon testbeds Ruiz C., Jeanvoine E., Nussbaum L. In [Research Report] RR-8955, Inria 2016.

Secure Android Covert Channel with Robust Survivability to Service Provider Restrictions Srinivasan A., Wu J., Shi J. In International Journal of Security and Networks January 2016.

Programming Models for Exascale Systems Panda D. K. In HPC Advisory Council Stanford Conference. February 2016.

Chameleon, CloudLab, Grid’5000: What will the ultimate testbed look like Nussbaum L. In Grid'5000 Winter School. February 2016.

Regulatory Polymorphisms Modulate the Expression of Hla Class Ii Molecules and Promote Autoimmunity Raj P., Rai E., Song R., Khan S., Wakeland B. E., Viswanathan K., Arana C., Liang C., Zhang B., Dozmorov I., Carr-Johnson F., Mitrovic M., Wiley G. B., Kelly J. A., Lauwerys B. R., Olsen N. J., Cotsapas C., Garcia C. K., Wise C. A., Harley J. B., Nath S. K., James J. A., Jacob C. O., Tsao B. P., Pasare C., Karp D. R., Li Q. Z., Gaffney P. M., Wakeland E. K. In eLife. February 2016.

Leveraging In-transit Computational Capabilities in Federated Ecosystems Zou M., Zamani A.R., Diaz-Montes J., Petri I., Rana O., Parashar M. In IEEE International Symposium On Service-Oriented System Engineering (SOSE). March 2016.

The Scalability Dilemma and the Case for Decoupling Shi J.Y. In HPCwire.com. March 2016.

Context-aware cloud computing for HEP Sobie R. In International Symposium on Grids & Clouds (ISGC). March 2016.

Building Efficient HPC Clouds with MVAPICH2 and OpenStack over SR-IOV enabled InfiniBand Clusters Panda D. K., Lu X. In OpenStack Summit. April 2016.

Designing HPC and Big Data Middleware for Exascale Systems: Challenges and Opportunities Panda D. K. In IBM Ireland. April 2016.

High-Performance MPI Library with SR-IOV and Slurm for Virtualized InfiniBand Clusters Panda D. K., Lu X. In International OpenFabrics Alliance Workshop (OFAWS). April 2016.

Reducing Waste in Large Scale Systems Through Introspective Analysis Bautista-Gomez L., Gainaru A., Perarnau S., Tiwari D., Gupta S., Cappello F., Engelmann C., Snir M. In 2016 IEEE International Parallel and Distributed Processing Symposium (IPDPS). IEEE Press. May 2016.

Measurement uncertainty matters: ecological management using POMDPs Memarzadeh M., Boettiger C. In bioRxiv: The Preprint Server for Biology. May 2016.

Systemwide Power Management with Argo Ellsworth D. et al In 2016 IEEE International Parallel and Distributed Processing Symposium Workshops (IPDPSW). IEEE Press. May 2016.

Performance Characterization of Hypervisor- and Container-based Virtualization for HPC on SR-IOV Enabled InfiniBand Clusters Zhang J., Lu X., Panda D. K. In 1st Annual Workshop on Emerging Parallel and Distributed Runtime Systems and Middleware (IPDRM) held in conjunction with International Parallel and Distributed Processing Symposium (IPDPS). May 2016.

Towards Self-Management of Distributed Data-Driven Workflows (D3W) Zou M., Diaz-Montes J., Nagaraja K., Radia N., Parashar M. In 7th IEEE International Conference on Cloud Computing (IEEE CLOUD). June 2016.

Efficient distributed algorithm for scheduling workload-aware jobs on multi-clouds Miraftabzadeh S. A., Rad P., Jamshidi M. In 11th System of Systems Engineering Conference (SoSE). IEEE Press. June 2016.

Evaluating Cost of Cloud Execution in a Data Repository Xie Z., Chen Y., Speer J., Walters T. In 16th ACM/IEEE-CS on Joint Conference on Digital Libraries. IEEE Press. June 2016.

Nearline Web Archiving Xie Z., Nayyar K., Fox E.A. In Web Archiving and Digital Library Workshop. June 2016.

Are Repositories Impeding Big Data Reuse Xie Z., Galad A., Chen Y., Fox E. In 11th International Conference on Open Repositories. June 2016.

Kepler + CometCloud: Dynamic Scientific Workflow Execution on Federated Cloud Resources Wang J., Abdelbaky M., Diaz-Montes J., Purawat S., Parashar M., Altintas I. In International Conference on Computational Science (ICCS). June 2016.

Optimization of Tomographic Reconstruction Workflows on Geographically Distributed Resources Bicer T., Gursoy D., Kettimuthu R., De Carlo F., Foster I.T. In Journal of Synchrotron Radiation. July 2016.

Optimization of tomographic reconstruction workflows on geographically distributed resources Bicer T., Gursoy D., Kettimuthu R., De Carlo F., Foster I. T. In Journal of Synchrotron Radiation. July 2016.

SLURM-V: Extending SLURM for Building Efficient HPC Cloud with SR-IOV and IVShmem Zhang J., Lu X., Chakraborty S., Panda D. K. In The 22nd International European Conference on Parallel and Distributed Computing (Euro-Par). August 2016.

OSI Standards and the Top Fallacy of Distributed Computing Shi, J.Y. In Sustainable HPC Workshop ICPP Forum: Sustainable HPC Workshop ICPP. IEEE Press. August 2016.

High Performance MPI Library for Container-based HPC Cloud on InfiniBand Clusters Zhang J., Lu X., Panda D. K. In The 45th International Conference on Parallel Processing (ICPP). IEEE Press. August, 2016.

High-Contrast Imaging in the Cloud with klipReduce and Findr Haug-Baltzella A., Males J.R., Morzinski K.M., Wu Y., Merchant N., Lyons E., Close L.M. In Software and Cyberinfrastructure for Astronomy III. August 2016.

Exploring Data Migration for Future Deep-Memory Many-Core Systems Perarnau S., Zounmevo J.A., Gerofi B., Iskra K., Beckman P. In 2016 IEEE International Conference on Cluster Computing (CLUSTER). IEEE Press. September 2016.

Incremental Stream Processing of Nested-Relational Queries Fegaras L. In DEXA 2016: Proceedings, Part I, 27th International Conference on Database and Expert Systems Applications September 2016.

A Query Processing Framework for Array-Based Computations Fegaras L. In DEXA 2016: Proceedings, Part I, 27th International Conference on Database and Expert Systems Applications September 2016.

BICP: Block-Incremental CP Decomposition with Update Sensitive Refinement Huang S., Candan K.S., Sapino M.L. In Conference on Information and Knowledge Management (CIKM). October 2016.

Enabling Research Network Connectivity to Clouds with Virtual Router Technology Seuster R. et al In International Conference on Computing in High Energy and Nuclear Physics (CHEP). October 2016.

Context-aware distributed cloud computing using CloudScheduler Sobie R. In International Conference on Computing in High Energy and Nuclear Physics (CHEP). October 2016.

Consolidation of Cloud Computing in ATLAS Taylor R.P. et al In International Conference on Computing in High Energy and Nuclear Physics (CHEP). October 2016.

Visualization and Adaptive Subsetting of Earth Science Data in HDFS - A Novel Data Analysis Strategy with Hadoop and Spark Yang X., Liu S., Feng K., Zhou S., Sun X. In 6th IEEE International Conference on Big Data and Cloud Computing (BDCloud). IEEE Press. October 2016.

Rolling in the Deep Analytics: Big Data Comes to Scholarly Communication Tananbaum G., de Waard A., Xie Z. In Charleston Library Conference. October 2016.

Resource Management with Deep Reinforcement Learning Mao H., Alizadeh M., Menache I., Kandula S. In HotNets workshop. November 2016.

Monitoring Strategies for Scalable Dynamic Checkpointing Perarnau S., Bautista-Gomez L. In 2016 Seventh International Green and Sustainable Computing Conference (IGSC). IEEE Press. November 2016.

Altruistic Scheduling in Multi-Resource Clusters Grandl R., Chowdhury M., Akella A., Ananthanarayanan G. In 12th USENIX Symposium on Operating Systems Design and Implementation (OSDI ’16). November 2016.

Benchmarking under the hood of OpenCL FPGA platforms Yoshii K., Finkel H., Cappello F. In H2RC workshop. November 2016.

Re-Form: FPGA-Powered True Codesign Flow for High-Performance Computing Cappello F., K Yoshii., Finkel H., Cong J. In PMES workshop. November 2016.

Asterism: Pegasus and dispel4py hybrid workflows for data-intensive science Filgueira R.,Ferreira da Silva R., Krause A., Deelman E., Atkinson M. In 7th International Workshop on Data-Intensive Computing in the Clouds (DataCloud). IEEE Press. November 2016.

Incremental Query Processing on Big Data Streams Fegaras L. In IEEE Transactions on Knowledge and Data Engineering. IEEE Press. November 2016.

High-Performance Design of Apache Spark with RDMA and Its Benefits on Various Workloads Lu X., Shankar D., Gugnani S., Panda D. K. In IEEE International Conference on Big Data (IEEE BigData). December 2016.

Performance Characterization of Hadoop Workloads on SR-IOV- enabled Virtualized InfiniBand Clusters Gugnani S., Lu X., Panda D. K. In 3rd IEEE/ACM International Conference on Big Data Computing, Applications and Technologies (BDCAT). IEEE Press. December 2016.

A Next-Generation Secure Cloud-Based Deep Learning License Plate Recognition for Smart Cities Polishetti R., Roopaei M., Rad P. In 15th IEEE International Conference on machine Learning and Application. IEEE Press. December 2016.

Impact of HPC Cloud Networking Technologies on Accelerating Hadoop RPC and HBase Lu X., Shankar D., Gugnani S., Subramoni H., Panda D. K. In 8th IEEE International Conference on Cloud Computing Technology and Science (CloudCom). IEEE Press. December 2016.

2015

The Evolution of Cloud Computing in ATLAS Taylor R. et al In International Conference on Computing in High Energy and Nuclear Physics (CHEP). April 2015.

Utilizing cloud computing resources for Belle-II Sobie R. In International Conference on Computing in High Energy and Nuclear Physics (CHEP). April 2015.

HEP production using the HTCondor/CloudScheduler architecture Gable I. et al In International Conference on Computing in High Energy and Nuclear Physics (CHEP). April 2015.

MVAPICH2 over OpenStack with SR-IOV: An Efficient Approach to Build HPC Clouds Zhang J., Lu X., Arnold M., Panda D. K. In IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing (CCGrid). IEEE Press. May 2015.

Image segmentation by multi-level thresholding based on fuzzy entropy and genetic algorithm in cloud Muppidi M., Rad P., Agaian S. S., Jamshidi M. In 10th System of Systems Engineering Conference (SoSE). IEEE Press. May 2015.

A Framework for Realizing Software-Defined Federations for Scientific Workflows Abdelbaky M., Diaz-Montes J., Zou M., Parashar M. In BigSystem '15: Proceedings of the 2nd International Workshop on Software-Defined Ecosystems. June 2015.

Testbeds for Reproducible Research Nussbaum L. In REPPAR - 2nd International Workshop on Reproducibility in Parallel Computing. August 2015.

Rapid Tomographic Image Reconstruction via Large-Scale Parallelization Bicer T., Gursoy D., Kettimuthu R., De Carlo F., Agrawal G., Foster I. In International European Conference on Parallel and Distributed Computing (EuroPar). August 2015.

A look at Grid’5000, CloudLab and Chameleon Nussbaum L. In 4th GENI / FIRE Collaboration Workshop Washington, DC, United States. September 2015.

Secure image processing inside cloud file sharing environment using lightweight containers Rad P., Muppidi M., Agaian S. S., Jamshidi M. In IEEE International Conference on Imaging Systems and Techniques (IST). IEEE Press. September 2015.

Supporting Data-intensive Workflows in Software-defined Federated Multi-Clouds Diaz-Montes J., Diaz-Granados M., Zou M., Tao S., Parashar M. In IEEE Transactions in Cloud Computing. September 2015.

Supporting SR-IOV and IVSHMEM in MVAPICH2 on Slurm: Challenges and Benefits Lu X. In The 6th Slurm User Group Meeting (SLUG). September 2015.

Communication Frameworks for HPC and Big Data Panda D. K. In HPC Advisory Council Spain Conference. September 2015.

Next Generation Clouds, the Chameleon Cloud Testbed, and Software Defined Networking (SDN) Mambretti J., Chen J., Yeh F. In International Conference on Cloud Computing Research and Innovation (ICCCRI). IEEE Press. October 2015.

Phantom of the cloud: Towards improved cloud availability and dependability Hadley B., Hume A., Lindberg R., Obraczka K. In IEEE 4th International Conference on Cloud Networking (CloudNet). IEEE Press. October 2015.

Argo: An Exascale Operating System and Runtime Perarnau S., Gupta R., Beckman P. et al In International Conference for High Performance Computing, Networking, Storage and Analysis (SC) November 2015.

Comparison of Virtualization and Containerization Techniques for High-Performance Computing Zhou Y. et al. In SC15. November 2015.

Scaling Smart Appliances for Spatial Data Synthesis Pineda-Morales L. et al In SC15. November 2015.

Docker Containers Across Multiple Clouds and Data Centers Abdelbaky M., Unuvar M., Diaz-Montes J., Steinder M., Parashar M. In Cloud Challenge in conjunction with 8th IEEE/ACM International Conference on Utility and Cloud Computing. December 2015.

Designing HPC and Big Data Middleware for Exascale Systems: Opportunities and Challenges Panda D. K. In South African High-Performance Computing Conference (CHPC). December 2015.

On-Demand Big Data Analysis in Digital Repositories: A Lightweight Approach Using Docker Xie Z. et al In Allen R., Hunter J., Zeng M. (eds) Digital Libraries: Providing Quality Information. ICADL 2015. Lecture Notes in Computer Science, vol 9469. December 2015.

2014

Content-based histopathology image retrieval using CometCloud Qi X., Wang D., Rodero I., Diaz-Montes J., Gensure R.H., Xing F., Zhong H., Goodell L.A., Parashar M., Foran D.J., Yang L. In BMC Bioinformatics. August 2014.